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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888802.1_cds_XP_016443429.1_38591
CDS Infomation

[gene=LOC107768791] [db_xref=GeneID:107768791] [protein=branched-chain-amino-acid aminotransferase-like protein 1] [protein_id=XP_016443429.1] [location=join(8179..8259,9093..9191,9380..9451,10468..10560,10839..10976,13316..13374,14953..15055,15586..15774,15881..15981,17146..17200,17318..17404,17563..17614,18190..18275,19670..19723,26528..26611,26918..26989,28110..28190,29572..29607,30126..30254)] [gbkey=CDS]
Sequence

ATGGGAGAAGAAATTGAGGTGATCCATTCATGGTCTGCACCCAGGTCTCTAAGTACCAGC
CTCATGTACTCTTTTGCCCAGAGAAATGACATCGAAGTTCTTGATGAACCACTGTATGCA
AATTTTCTGCGGGTGACTGGAGCAGATAGACCTTACAAGGAAGAACTTAGGTCCAAAATG
GACAATGATGGAAATAAAGTGGTGAAGGAGGTCATCTTTGGTGCCGGAGTAAAGAAGTAC
CGCTATTGTAAGCATATAGCCAAACAACGTGTGCCAGGTTTGACAAATGAATTGATGAAG
AGAGGAAAGCACTTCATCCTGATAAGGAATCCCCTTGATATCTTGCCATCTTTTGATAAG
GTTGTGCCTCCATCCTTTGTTGAGCTGGGGTTGGCAGAGCTGGTCTCCATATACAGCGAG
CTATCTGAATTAGGAAAGCCCCCACCAGTTATTGATGCTGCAGATATTCAAGAAAATCCT
GAGGCGGCCCTCCGTGGCCTTTGTGAAGACCTTGACATTCCATTTCAAGATTCAATGCTC
AGGTGGGAAGCTGGGCCAAAATCATTTGATGGCATATGGGCACCATGGTGGTATAAAAGT
GTGCATAAGTCAACAGGTTTTGCTCCAGCAAAGAAATACCCTACGCCATTTCCAACATCA
TTATATGATTTGCTGGAGCAAAGCCTACCCTTTTACAACATGCTTAAGCGTCACACAAGA
CGATCTTCTTATATCCTGAACTCAACTTTACCTCATCCCAGTCTTCCTGTTCCTGCTAAT
GAGAAGCTGCTTGCATGGGTTGGTGATGAGATTGTGCCCCGTGAGACTGCCAAGGTTTCA
GTGTTTGATTCAGTTGTCCAAGGTGGTGATGCAGTATGGGAGGGGCTTCGAGTGTACAGT
GGGAAGCTATTTAAGCTTGAGGAGCATTTAGATAGGTTGTTCGACTCCGCGAAAGCACTA
GCTTTCAGCAATGTACCAACTCGTGAAGAGGTCAAAGAAGCTATTTTCAAGACTCTTTTA
ACAAATGGAATGTTTGATAATGCACATATCCGACTAACTTTGACACGTGGTAAAAAGGTA
ACCTCAGGAATGAGCCCTGCATTCAATCGATATGGGTGTACTTTAATTGTTCTTGCTGAA
TGGAAACCTCCAGTCTATGACAATGAAAAGGGCATAACGCTAGTGACGGCAACCACTCGT
CGTAATTCACCAAATAATTTGGATTCGAAGATTCACCATAACAACCTTCTCAACAACATT
CTCGCAAAGATAGAAGGAAATAATGCTGGGGCTGATGATGCCGTCATGCTTGATAAAGAT
GGCTATGTGTCAGAAACTAATGCTACAAATATATTCTTAGTGAAGAAAGGGCGCGTGGTG
ACACCTCATGCTGATTATTGCCTTCCTGGCATAACAAGAGCAACAGTCATGGAGCTTGTG
CTGAAGGAAAATTTAGTTTTAGAGGAGCGACGAATTAGCTTATCAGAATTTCACACTGCC
GATGAGGTGTGGACAACAGGAACTATGGGGGAACTTAGCCCGGTTGTCAAGATTGATGGA
CGTATAATCGGTGACGGTCGAGTGGGACCTGTAACACAGAGATTGCAAAATGCTTACAAA
AAGCTGGCAGAAGAATCAGGAGTGTCTATACCAATCTATCAAAAGAGCTAA

Peptide Sequence

PEP ID

XP_016443429.1
PEP Infomation

PREDICTED: branched-chain-amino-acid aminotransferase-like protein 1 [Nicotiana tabacum]
Sequence

MGEEIEVIHSWSAPRSLSTSLMYSFAQRNDIEVLDEPLYANFLRVTGADRPYKEELRSKM
DNDGNKVVKEVIFGAGVKKYRYCKHIAKQRVPGLTNELMKRGKHFILIRNPLDILPSFDK
VVPPSFVELGLAELVSIYSELSELGKPPPVIDAADIQENPEAALRGLCEDLDIPFQDSML
RWEAGPKSFDGIWAPWWYKSVHKSTGFAPAKKYPTPFPTSLYDLLEQSLPFYNMLKRHTR
RSSYILNSTLPHPSLPVPANEKLLAWVGDEIVPRETAKVSVFDSVVQGGDAVWEGLRVYS
GKLFKLEEHLDRLFDSAKALAFSNVPTREEVKEAIFKTLLTNGMFDNAHIRLTLTRGKKV
TSGMSPAFNRYGCTLIVLAEWKPPVYDNEKGITLVTATTRRNSPNNLDSKIHHNNLLNNI
LAKIEGNNAGADDAVMLDKDGYVSETNATNIFLVKKGRVVTPHADYCLPGITRATVMELV
LKENLVLEERRISLSEFHTADEVWTTGTMGELSPVVKIDGRIIGDGRVGPVTQRLQNAYK
KLAEESGVSIPIYQKS

Transcript Sequence

Gene sequence data has not been registered.